sequence database

Sequence databases can be searched using a variety of methods.

In some cases part libraries correspond to parts imported from a single source such as another sequence database.

We initially considered using Ensembl as our sequence database.

There's no doubt, however, that others are poring through the sequence databases, looking for cases of other genes.

It is generally applied on a sequence database.

These are predicted in all mammalian orthologs in the public sequence database.

Many peptide sequences have been in sequence databases.

Metathesaurus concepts can also link to resources outside of the database, for instance gene sequence databases.

This program compares a protein query against the all six reading frames of a nucleotide sequence database.

It contains programs that can search for similar protein sequences in protein sequence databases.

This information is currently being put in a reference sequence database that would make it easily accessible for forensic entomologists around the world.

These techniques generally consist of comparing the sequence to other sequences from sequence databases.

Background Recent progress in genomic sequencing has led to the rapid enrichment of protein sequence databases.

Bacterial sequences with similarity to the B. anthracis cap genes are present in sequence databases.

The EMP must avoid a problem that has become prevalent in the public sequence databases.

Sequence Database Searching is widely used currently for mass spectra based protein identification.

Bioinformatics tools and biological sequence databases are also necessary for high-throughput phosphoproteomic studies.

The sequence-driven approach to screening is limited by the breadth and accuracy of gene functions present in public sequence databases.

Many different sequence databases use standardized headers, which helps when automatically extracting information from the header.

Thus, Sequence Database Searching faces a bottleneck of limited specificity.

Mascot is a software search engine that uses mass spectrometry data to identify proteins from primary sequence databases.

I want to search a sequence database for homologs that significantly match the sequence and structure of my query.

Serratus is the most comprehensive, non-redundant protein sequence database available to the protein chemist.

The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

Some human U40 sequences have been annotated in the sequence databases (Genbank) as U46.